Assuming that the hidden states form a coxian structure, adds the value
epsilon, which is defined in section , to
every element of the hidden state transition matrix, A, the symbol
emission probability matrices, p,q and r, and the initial
hidden state probability vector, pi, and normalizes them to satisfy the
stochastic constrains.
Usage: fix_coxian(N, B)
where N is the number of hidden states; and B is the
observation batch size.